Monday, July 20, 2009

How do I find out Linux Resource utilization to detect system bottlenecks?


Q. How can I find out Linux Resource utilization using vmstat command? How do I get information about high disk I/O and memory usage?

A. vmstat command reports information about processes, memory, paging, block IO, traps, and cpu activity. However, a real advantage of vmstat command output - is to the point and (concise) easy to read/understand. The output of vmstat command use to help identify system bottlenecks. Please note that Linux vmstat does not count itself as a running process.

Here is an output of vmstat command from my enterprise grade system:
$ vmstat -S M
Output:

procs -----------memory---------- ---swap-- -----io---- --system-- ----cpu----
r b swpd free buff cache si so bi bo in cs us sy id wa
3 0 0 1963 607 2359 0 0 0 0 0 1 32 0 68 0

Where,

  • The fist line is nothing but six different categories. The second line gives more information about each category. This second line gives all data you need.
  • -S M: vmstat lets you choose units (k, K, m, M) default is K (1024 bytes) in the default mode. I am using M since this system has over 4 GB memory. Without -M option it will use K as unit

$ vmstat
Output:

procs -----------memory---------- ---swap-- -----io---- --system-- ----cpu----
r b swpd free buff cache si so bi bo in cs us sy id wa
3 0 0 2485120 621952 2415368 0 0 0 0 0 1 32 0 68 0

Field Description For Vm Mode

(a) procs is the process-related fields are:

  • r: The number of processes waiting for run time.
  • b: The number of processes in uninterruptible sleep.

(b) memory is the memory-related fields are:

  • swpd: the amount of virtual memory used.
  • free: the amount of idle memory.
  • buff: the amount of memory used as buffers.
  • cache: the amount of memory used as cache.

(c) swap is swap-related fields are:

  • si: Amount of memory swapped in from disk (/s).
  • so: Amount of memory swapped to disk (/s).

(d) io is the I/O-related fields are:

  • bi: Blocks received from a block device (blocks/s).
  • bo: Blocks sent to a block device (blocks/s).

(e) system is the system-related fields are:

  • in: The number of interrupts per second, including the clock.
  • cs: The number of context switches per second.

(f) cpu is the CPU-related fields are:

These are percentages of total CPU time.

  • us: Time spent running non-kernel code. (user time, including nice time)
  • sy: Time spent running kernel code. (system time)
  • id: Time spent idle. Prior to Linux 2.5.41, this includes IO-wait time.
  • wa: Time spent waiting for IO. Prior to Linux 2.5.41, shown as zero.

As you see the first output produced gives averages data since the last reboot. Additional reports give information on a sampling period of length delay. You need to sample data using delays i.e. collect data by setting intervals. For example collect data every 2 seconds (or collect data every 2 second 5 times only):
$ vmstat -S M 2
OR
$ vmstat -S M 2 5
Output:

procs -----------memory---------- ---swap-- -----io---- --system-- ----cpu----
r b swpd free buff cache si so bi bo in cs us sy id wa
3 0 0 1756 607 2359 0 0 0 0 0 1 32 0 68 0
3 0 0 1756 607 2359 0 0 0 0 1018 65 38 0 62 0
3 0 0 1756 607 2359 0 0 0 0 1011 64 37 0 63 0
3 0 0 1756 607 2359 0 0 0 20 1018 72 37 0 63 0
3 0 0 1756 607 2359 0 0 0 0 1012 64 37 0 62 0
3 0 0 1756 607 2359 0 0 0 0 1011 65 38 0 63 0
3 0 0 1995 607 2359 0 0 0 0 1012 62 35 2 63 0
3 0 0 1731 607 2359 0 0 0 0 1012 64 34 3 62 0
3 0 0 1731 607 2359 0 0 0 0 1013 72 38 0 62 0
3 0 0 1731 607 2359 0 0 0 0 1013 63 37 0 63 0

This is what most system administrators do to identify system bottlenecks. I hope all of you find vmstat data is concise and easy to read.

Friday, July 17, 2009

Scalr errors after install

After installing Scalr and adding a client I've tried to add an application to test out my setup. But at the second step I've got an alert saying:
-----------------------------
Error Type: LoadXML
Description: Incorrect XML
-----------------------------

A quick look at the apache log revealed the problem:
-----------------------------
File does not exist: /var/scalr/app/www/farm_amis.xml
-----------------------------

I thought that maybe I've missed a file so I did a svn checkout of scalr repository and tried to find the specified file:

#apt-get install subversion
#svn checkout http://scalr.googlecode.com/svn/trunk/ scalr-read-only
#find scalr-read-only -name farm_amis.xml -type f


Nothing came up. Weird. After a bit of looking around I've found a file called farm_amis_xml.php. So in fact farm_amis.xml was only a mod_rewrite directive.

Time to fix it, enable mod_rewrite and .htaccess files for apache2:

Edit /etc/apache2/sites-available/000-default and change the lines containing AllowOverride None to AllowOverride All

Go to /etc/apache2/mods-enabled and execute the following command:
# ln -s ../mods-available/rewrite.load

Restart apache2 server and everything should be ok:
#/etc/init.d/apache2 restart

Text manipulation 'sed'

1. #sed 's/string1/string2/g'
(Replace string1 with string2)

2. #sed 's/\(.*\)1/\12/g'
(Modify anystring1 to anystring2)

3. #sed '/ *#/d; /^ *$/d'
(Remove comments and blank lines)

4. #sed ':a; /\\$/N; s/\\\n//; ta'
(Concatenate lines with trailing \)

5. #sed 's/[ \t]*$//'
(Remove trailing spaces from lines)

6.# sed 's/\([`"$\]\)/\\\1/g'
(Escape shell metacharacters active within double quotes)

7.#seq 10 | sed "s/^/ /; s/ *\(.\{7,\}\)/\1/"
(Right align numbers)

8.#sed -n '1000p;1000q'
(Print 1000th line)

9.#sed -n '10,20p;20q'
(Print lines 10 to 20)

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</a> <a class='post-count-link' href='https://kiranjith83.blogspot.com/2009_05_10_archive.html'> 05/10 - 05/17 </a> <span class='post-count' dir='ltr'>(11)</span> </li> </ul> </li> </ul> </div> </div> <div class='clear'></div> </div> </div><div class='widget PopularPosts' data-version='1' id='PopularPosts1'> <h2>Popular Posts</h2> <div class='widget-content popular-posts'> <ul> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2011/11/password-policy-rules-in-linux.html'>Password policy rules in Linux</a></div> <div class='item-snippet'> Setting up stronger password policy rules in Linux Increased password security is no longer an optional item in setting up a ...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2010/03/8-postfix-transport-table-smtp-routing.html'>8. Postfix Transport Table - SMTP Routing</a></div> <div class='item-snippet'>     This feature allows to route messages to additional domains according to the Map defined. Here Postfix accepts the message and rather t...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2009/10/linux-securirty-notes-14-squid-notes-8.html'>Linux Securirty Notes 14: Squid notes 8: Cache Hierarchies & Transparent Proxy</a></div> <div class='item-snippet'>Squid cache Hierarchies : Parent-Child Hierarchies:     Here we will define the parent child cache peering relationship. The cache will ...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2009/08/linux-system-check-commands.html'>Linux System check commands</a></div> <div class='item-snippet'> CPU info # cat /proc/cpuinfo; echo processor : 0 vendor_id : GenuineIntel cpu family : 6 model : 15 model nam...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2010/01/4-selinux-type-context-chcon-restorecon.html'>4. SELinux TYPE Context : chcon & restorecon</a></div> <div class='item-snippet'> Changing and restoring the Types:(chcon with Apache public directory) We will explain the usage of chcon and restorecon with the followi...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2010/02/4-postfix-aliases-forward-file.html'>4. Postfix Aliases & .forward file</a></div> <div class='item-snippet'> Aliases     The common entries in aliases file are postmaster, abuse etc. The default aliases file is located at the /etc/aliases used by ...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2009/07/scalr-errors-after-install.html'>Scalr errors after install</a></div> <div class='item-snippet'>After installing Scalr and adding a client I've tried to add an application to test out my setup. But at the second step I've got an...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2014/06/how-to-tunnel-everything-through-ssh.html'>How to tunnel everything through SSH</a></div> <div class='item-snippet'> Problem: You don’t trust your Internet connection (public wifi at a cafĂ©, airport, ..), or perhaps it’s being limited by a firewall (C...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-thumbnail'> <a href='https://kiranjith83.blogspot.com/2011/06/ipv6-chapter-2-addressing-architecture.html' target='_blank'> <img alt='' border='0' src='https://lh3.googleusercontent.com/blogger_img_proxy/AEn0k_tlPqfoTvDqMd-kDq3maAauNKD0-rGdzTFwSWrGStIIeKZK8VRSRE3-5-p8I6Ru_PgmyewhozL1iCSUEOw4zmBDVP6PTp-9Rx1Vkd7LcZ1lRIjHcyJLhwywAyXdojeF1uIpbCavDlJ10Bq47utqdFskuMXbMfcyv06UmOHMDMKBoKaTnyFQ=w72-h72-p-k-no-nu'/> </a> </div> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2011/06/ipv6-chapter-2-addressing-architecture.html'>IPV6 - Chapter 2 - Addressing architecture in IPv6</a></div> <div class='item-snippet'> Abstract This white paper discusses IPv6 addressing and compares it with IPv4. It outlines the three types of IPv6 address – unicast, mul...</div> </div> <div style='clear: both;'></div> </li> <li> <div class='item-content'> <div class='item-title'><a href='https://kiranjith83.blogspot.com/2010/12/installing-and-configuring-modsecurity.html'>Installing and configuring mod_security-Ubuntu 9.04</a></div> <div class='item-snippet'> This how-to is reported to work in Ubuntu 8.04-10.10 as well. What is mod_security you ask ? 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